Publications acknowledging the MaCuMBA project:


Insights into the Physiology and Ecology of the Brackish-Water-Adapted Cyanobacterium Nodularia spumigena CCY9414 Based on a Genome-Transcriptome Analysis

Bjoern Voß, Henk Bolhuis, David P. Fewer, Matthias Kopf, Fred Moeke, Fabian Haas,Rehab El-Shehawy, Paul Hayes, Birgitta Bergman, Kaarina Sivonen, Elke Dittmann, Dave J. Scanlan, Martin Hagemann, Lucas J. Stal, Wolfgang R. Hess

PLoS One, 2013


Metagenomics uncovers a new group of low GC and ultra-small marine Actinobacteria

Rohit Ghai, Carolina Megumi Mizuno, Antonio Picazo, Antonio Camacho & Francisco Rodriguez-Valera

Scientific Reports, 2013


Complete Genome Sequence of the Copiotrophic Marine Bacterium Alteromonas macleodii Strain ATCC 27126T

Aitor Gonzaga, Mario López-Pérez, Ana-Belen Martin-Cuadrado, Rohit Ghai and Francisco Rodriguez-Valera

Journal of Bacteriology, 2012


Polyclonality of Concurrent Natural Populations of Alteromonas macleodii

Aitor Gonzaga, Ana-Belen Martin-Cuadrado, Mario López-Pérez, Carolina Megumi Mizuno, Inmaculada García-Heredia, Nikole E. Kimes, Purificación Lopez-García, David Moreira, David Ussery, Mila Zaballos, Rohit Ghai and Francisco Rodriguez-Valera

Genome Biology and Evolution, 2012


Expanding the Marine Virosphere Using Metagenomics

Carolina Megumi Mizuno, Francisco Rodriguez-Valera, Nikole E. Kimes, Rohit Ghai

PLoS Genetics, 2013


Genomic Diversity of “Deep Ecotype” Alteromonas macleodii Isolates: Evidence for Pan-Mediterranean Clonal Frames

Mario López-Pérez, Aitor Gonzaga and Francisco Rodriguez-Valera

Genome Biology and Evolution, 2013


Evidence for metaviromic islands in marine phages

Carolina Megumi Mizuno, Rohit Ghai and Francisco Rodriguez-Valera

Frontiers in Microbiology, 2014


Tales from a thousand and one phages

Francisco Rodriguez-Valera, Carolina Megumi Mizunoa & Rohit Ghaia

Bacteriophage, 2014


Homologous recombination is involved in the diversity of replacement flexible genomic islands in aquatic prokaryotes

Mario López-Pérez, Ana-Belen Martin-Cuadrado and Francisco Rodriguez-Valera

Frontiers in Genetics, 2014


Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer

S. Balzano, P. Gourvil, R. Siano, M. Chanoine, D. Marie, S. Lessard, D. Sarno, and D. Vaulot

Biogeosciences, 2012


Parvilucifera rostrata sp. nov. (Perkinsozoa), a Novel Parasitoid that Infects Planktonic Dinoflagellates

Frédéric Lepelletiera, Sergey A. Karpov, Sophie Le Pansee, Estelle Bigeard, Alf Skovgaard, Christian Jeanthon, Laure Guillou

Protist, 2014


Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean

Dominique Boeuf, Matthew T. Cottrell, David L. Kirchman, Philippe Lebaron, Christian Jeanthon

FEMS Micriobiology Ecology, 2013


An improved protocol for flow cytometry analysis of phytoplankton cultures and natural samples

Dominique Marie, Fabienne Rigaut-Jalabert, and Daniel Vaulot

Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2014


Spatiotemporal changes in the genetic diversity of harmful algal blooms caused by the toxic dinoflagellate

A. Dia , L. Guillou , S. Mauger , E. Bigeard , D. Marie , M. Valero , C. Destombe

Molecular Ecology, 2014


Development of a targeted metagenomic approach to study a genomic region involved in light harvesting in marine

Florian Humily , Gregory K. Farrant , Dominique Marie , Frédéric Partensky , Sophie Mazard , Morgan Perennou , Karine Labadie , Jean-Marc Aury , Patrick Wincker , Audrey Nicolas Segui , David J. Scanlan , Laurence Garczarek

FEMS Micriobiology Ecology, 2014


A Gene Island with Two Possible Configurations Is Involved in Chromatic Acclimation in Marine Synechococcus

Florian Humily , Frédéric Partensky , Christophe Six , Gregory K. Farrant , Morgane Ratin , Dominique Marie , Laurence Garczarek

PLoS One, 2013


Dinomyces arenysensis gen. et sp. nov. (Rhizophydiales, Dinomycetaceae fam. nov.), a Chytrid Infecting Marine Dinoflagellates

Frédéric Lepelletier , Sergey A. Karpov , Elisabet Alacid , Sophie Le Panse , Estelle Bigeard , Esther Garcés , Christian Jeanthon , Laure Guillou

Protist, 2014


Connecting thermal physiology and latitudinal niche partitioning in marine Synechococcus

Justine Pittera , Florian Humily , Maxine Thorel , Daphné Grulois , Laurence Garczarek , Christophe Six

ISME Journal, 2014


Brandtodinium gen. nov. and B. nutricula comb. Nov. (Dinophyceae), a dinoflagellate commonly found in symbiosis with polycystine radiolarians

Ian Probert , Raffaele Siano , Camille Poirier , Johan Decelle , Tristan Biard , Akihiro Tuji , Noritoshi Suzuki , Fabrice Not

Journal of Phycology, 2014


Genomes of Alteromonas australica, a world apart

Mario López-Pérez , Aitor Gonzaga , Elena P Ivanova , Francisco Rodriguez-Valera,

BMC Genomics, 2014


Marine Microorganisms as Source of Stereoselective Esterases and Ketoreductases: Kinetic Resolution of a Prostaglandin Intermediate

Valerio De Vitis , Benedetta Guidi , Martina Letizia Contente , Tiziana Granato , Paola Conti , Francesco Molinari , Elena Crotti , Francesca Mapelli , Sara Borin , Daniele Daffonchio , Diego Romano

Marine Biotechnology, 2014


Global and Phylogenetic Distribution of Quorum Sensing Signals, Acyl Homoserine Lactones, in the Family of Vibrionaceae

Bastian Rasmussen , Kristian Nielsen , Henrique Machado , Jette Melchiorsen , Lone Gram , Eva Sonnenschein

Marine Drugs, 2014


Dataset for metatranscriptome analysis of Prochlorococcus-rich marine picoplankton communities in the Gulf of Aqaba, Red Sea

Claudia Steglich , Damir Stazic , Steffen C. Lott , Karsten Voigt , Eyal Greengrass , Debbie Lindell , Wolfgang R. Hess

Marine Genomics, 2014


Depth dependent metatranscriptomes of the marine pico-/nanoplanktonic communities in the Gulf of Aqaba/Eilat during seasonal deep mixing

Ulrike Pfreundt , Dan Miller , Lakshmi Adusumilli , Noga Stambler , Ilana Berman-Frank , Wolfgang R. Hess

Marine Genomics, 2014


The primary transcriptome of the marine diazotroph Trichodesmium erythraeum IMS101

Ulrike Pfreundt , Matthias Kopf , Natalia Belkin , Ilana Berman-Frank , Wolfgang R. Hess

Scientific Reports, 2014


Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversity

Karsten Voigt , Cynthia M Sharma , Jan Mitschke , S Joke Lambrecht , Bjoern Voss , Wolfgang R Hess , Claudia Steglich

ISME Journal, 2014


Draft Genome Sequence of the Filamentous Cyanobacterium Leptolyngbya sp. Strain Heron Island J, Exhibiting Chromatic Acclimation

R. Paul , R. E. Jinkerson , K. Buss , J. Steel , R. Mohr , W. R. Hess , M. Chen , P. Fromme

Genome Announcement, 2014